CDS

Accession Number TCMCG065C23593
gbkey CDS
Protein Id XP_004975098.1
Location complement(join(5973853..5973938,5974262..5974657,5978188..5978418,5978498..5978651))
Gene LOC101758717
GeneID 101758717
Organism Setaria italica

Protein

Length 288aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA207554
db_source XM_004975041.4
Definition receptor homology region, transmembrane domain- and RING domain-containing protein 1 [Setaria italica]

EGGNOG-MAPPER Annotation

COG_category O
Description RING-like zinc finger
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K15692        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000306        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005774        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0019898        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031312        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043621        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044437        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCGGAGACGAGCATCTGATTCACAGGTCCACGCGATGAGCCCCCGCGTGGTCCTCCTCTTCCTCGCCGCCGCCCTCCGCCCCTGCGCCGCCCTTGTACGCCTCCATTCCAACTCCTTCTCCTTCACCTTCCTCGACGCCCCGGCGCGCTTTGGTCCTCGAGTGGGCAGCGATGGGATCTGCGGCTCGCTGCGCGCCGCCGAACCCGCCGAGGCGTGTGAGCCCATCAAAGACAGCGGCGGCCGCCGCGGCGCGGGCCGGAAGGCTTTTGTGCTGATCGCGAGGGGCAACTGCAGCTTCGAGGGCAAGGTGCGGGCGGCGCAGAAAGCGGGGTTTGACGCCGCCGTCGTGTACGACGATGAGGAAAAAGCCAGCCTCTACTCCATGGTTGGTGACTCTGAGGGTATACACATACCTGCAATATTCGTTTCCAAGATGGCTGGAGAAACACTAAAGAAGTTTGCCAGGGGTGAAGATGATGAGTGTTGTATAAACTCATCGATGGATGAGACTGCAGGAACAGTATTGGTAATGTCATTCGTATCACTTGTTGTCATCATATCTGTTCTTGCATCTTTTCTATTTGCTCGAAACTGCCGACTTCTACGTCATGGAGTTGATAATCACCCACCTTACGTCAAGAAACATGTGGTGGAAAAGCTTCCATGCTCAGCATATAGTGCTCCCTGTTCTAGCGAAGATATTTTTCAGGAAGCTTGTGCAATTTGTTTAGAAGACTACAATAATGGCGATATGCTTAGACACCTTCCATGCAAACATGAATTTCACAAGATCTGTATTGATTCCTGGCTCACAAAATGGGGCACCTTCTGCCCTATATGCAAGCTTGAAGTAACGTCCAGTTAA
Protein:  
MRRRASDSQVHAMSPRVVLLFLAAALRPCAALVRLHSNSFSFTFLDAPARFGPRVGSDGICGSLRAAEPAEACEPIKDSGGRRGAGRKAFVLIARGNCSFEGKVRAAQKAGFDAAVVYDDEEKASLYSMVGDSEGIHIPAIFVSKMAGETLKKFARGEDDECCINSSMDETAGTVLVMSFVSLVVIISVLASFLFARNCRLLRHGVDNHPPYVKKHVVEKLPCSAYSAPCSSEDIFQEACAICLEDYNNGDMLRHLPCKHEFHKICIDSWLTKWGTFCPICKLEVTSS